This is a first analysis of the COI metabarcording data from PacMAN available as of July 2023. Raw sequence data have been analyzed with the PacMAN bioinformatics pipeline and the resulting Darwin Core tables are included in this repository.

The source for this notebook is hosted at https://github.com/iobis/pacman-data-analysis.

Sample overview

Taxonomic composition

Beta diversity

Multidimensional scaling using reads per phylum.

Multidimensional scaling using species presence / absence.

Full species list

Introduced species

This is the subset of species which are listed in the World Register of Introduced Marine Species (WRiMS). These are not necessarily introduced in Fiji.